PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022967394.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 614aa MW: 67929.1 Da PI: 4.751

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022967394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.3	1.2e-12	448	493	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_022967394.1 448 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 493 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MTDYRVPPAM NLWADENASM MDVFTSTDLS SLWVTPPLPQ PQPQSQPLYS SVSTAIEPSK 60 PVGQEPPPPS LAVFNQETLM QRLQVLIEGA QESWTYAIFW QSSYYSGSNL LGWGDGYYKG 120 EEDKEKAKSS TSKTEQERRK TVLRELNSLI SGSPASDDDA VDEVVTDTEW FFLVSMTQSF 180 VSGVGLPGQA FFDSNPIWIS GSDRLASSFC ERARQGQIFG LQTMVCIPLV NGVVELGSSD 240 LIFLNSDLMN RVRVLFNFNN LEAETWPISG ENDPSLWITE PLSNAIEIKD AIETPSSSVP 300 PPPQKSNRQP QPVQKQSFLT PKELNFSEFG FENGSLKAES GEILNFSGTK RNSHPNTDNI 360 LPSGNPGGSD ENKKKTSSNE EGMLSFTSGV ILPSSGTAKS TGCIVDSDHS DLEASVIREV 420 ESNRAVEPEK RPRKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPNVSKMDKA 480 SLLGDAISYI NELKGKLQAA ESDKEELQKQ LDSVKKFISS SDQEVKASNY GIETDIDVKI 540 ISWDAMIRIQ SSKKNHPAAR LMAALEELDL DISHASISVV NDLMIQQATV KMGSRLYTQE 600 QLRIALSSKM GTAR

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MTDYRVPPAM NLWADENASM MDVFTSTDLS SLWVTPPLPQ PQPQSQPLYS SVSTAIEPSK  60
PVGQEPPPPS LAVFNQETLM QRLQVLIEGA QESWTYAIFW QSSYYSGSNL LGWGDGYYKG  120
EEDKEKAKSS TSKTEQERRK TVLRELNSLI SGSPASDDDA VDEVVTDTEW FFLVSMTQSF  180
VSGVGLPGQA FFDSNPIWIS GSDRLASSFC ERARQGQIFG LQTMVCIPLV NGVVELGSSD  240
LIFLNSDLMN RVRVLFNFNN LEAETWPISG ENDPSLWITE PLSNAIEIKD AIETPSSSVP  300
PPPQKSNRQP QPVQKQSFLT PKELNFSEFG FENGSLKAES GEILNFSGTK RNSHPNTDNI  360
LPSGNPGGSD ENKKKTSSNE EGMLSFTSGV ILPSSGTAKS TGCIVDSDHS DLEASVIREV  420
ESNRAVEPEK RPRKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPNVSKMDKA  480
SLLGDAISYI NELKGKLQAA ESDKEELQKQ LDSVKKFISS SDQEVKASNY GIETDIDVKI  540
ISWDAMIRIQ SSKKNHPAAR LMAALEELDL DISHASISVV NDLMIQQATV KMGSRLYTQE  600
QLRIALSSKM GTAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	430	438	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein