PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022967619.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YC

Protein Properties

Length: 253aa MW: 28281.9 Da PI: 6.9215

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022967619.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	173.1	2.9e-54	72	175	2	102
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93 ++fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++r d+fdflv XP_022967619.1 72 HQMFWANQmqeIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRIDVFDFLV 166 689**988889****************************************************************************** PP NF-YC 94 divprdelk 102 di+prdelk XP_022967619.1 167 DIIPRDELK 175 ****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MDQSERSQHQ QQSQQPAGGA GGVGGVGGAG TYSNPYQTAP LVASGTPAIT VPPTQLAFQQ 60 AQHFHHHQQQ QHQMFWANQM QEIEQTTDFK NHSLPLARIK KIMKADEDVR MISAEAPVVF 120 AKACEMFILE LTLRSWIHTE ENKRRTLQKN DIAAAISRID VFDFLVDIIP RDELKEEGHG 180 ITKASIPVVG SPADIPYYYV PSQHPVGATG MIMGKQLDQA NVYGATAQQQ RPPMPFMPWP 240 HTQPRQQQQQ QQQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	144	150	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	8e-80	NF-YC family protein