PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022967865.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 298aa    MW: 31181.3 Da    PI: 9.5835
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022967865.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.53.5e-063558225
                    -S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                    k ++C  f+ t  C++G++C+F H
  XP_022967865.1 35 KSKPCTKFFSTAGCPFGESCHFLH 58
                    6789******************** PP
2zf-CCCH25.81.9e-08101126227
                     -S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                     kt+ C+ f     Ck+Gd+C+FaHg+
  XP_022967865.1 101 KTRMCNKFNSAEGCKFGDKCNFAHGE 126
                     899*********************96 PP
3zf-CCCH38.22.4e-12265289126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     ykt+lC++fa+ G C +G+rC+FaHg
  XP_022967865.1 265 YKTKLCDNFAK-GSCTFGERCHFAHG 289
                     9**********.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDMRKRGRPE AAFNSNGSFK KHKQELESLS TVGGKSKPCT KFFSTAGCPF GESCHFLHYV  60
PGGYNAVAQM MNLAPVGSQP SRNMAAPPVS NGGSSAPSQI KTRMCNKFNS AEGCKFGDKC  120
NFAHGEWELG RPTPPSHDNP RGMGGGHMVG RMGGRMDLPP PGPAASFGAS ATAKISIDAS  180
LAGAIIGKGG INSKQICRQT GAKLSIRDNE SDPNLRNIEL EGTFEQINEA SAMVRELIIT  240
VSMSGPGKAH GAMGGGGPAP SGSNYKTKLC DNFAKGSCTF GERCHFAHGA AELRKSGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06770.11e-52C3H family protein