PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022967869.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 234aa    MW: 26744.3 Da    PI: 5.5921
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022967869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.12e-0831542448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W++Ia++++  Rt++++k++w+++l
   XP_022967869.1 31 WAAIASYLP-QRTDNDIKNYWNTHL 54
                     *********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MDELPEAWNQ KRQLHAPRGR NDHPFASFIG WAAIASYLPQ RTDNDIKNYW NTHLKKKLKS  60
VLDHSTTSEF FSKGFFNDSS TRTLDFDSSS ASCFYPNRSS TATPSSSSTY YSSAENISRL  120
LEGWMRSSPK TNDNDNPFHF DEKQSHCGDS MVSNQYREMK TEQDENRVAS MKEIESMVSP  180
ENLNNSKHNN LGASCENNNN NNNNNNPPLS FLEKWLLDDT CVQVVEMMPL SPTF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15460LKKKLKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.22e-26MYB_related family protein