PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022967871.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 312aa    MW: 34180.1 Da    PI: 9.2596
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022967871.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.42.2e-19181214134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022967871.1 181 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 214
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MAPPYRDSFP SNHDNLIRYP SSSSDRHLFF PTTPLDSSPS SPLSFPLFPD LHRSNPDHPH  60
SLGFHHQEDG GFMGCENDQV HESNQEVETG LSFTIWKSET SSNDHNHNDS VKWSSSSSSS  120
SSKIRLVINY NQTETLAKTI DAHRNFQDLN PMSPSPSPSP SDQTNKRNAL NDGGGAIIRT  180
CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAMAEA ANGGNPTAVV LKTNKAIIKP  240
AATMKRKHKE VVAATTATTA AGGGGRRKLC VEDVKMGRRL NEIASTYQRV FPQDEREAAI  300
LLMTLSYGLL HG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.16e-27GATA family protein