PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022967879.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 304aa    MW: 33383.2 Da    PI: 9.8216
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022967879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.1e-19173206134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022967879.1 173 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 206
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MAPPYRDSFP SNHDNLIRYP SSSSDRHLFF PTTPLDSSPS SPLSFPLFPD LHRSNPDHPH  60
SLGFHHQEND QVHESNQEVE TGLSFTIWKS ETSSNDHNHN DSVKWSSSSS SSSSKIRLVI  120
NYNQTETLAK TIDAHRNFQD LNPMSPSPSP SPSDQTNKRN ALNDGGGAII RTCSDCNTTK  180
TPLWRSGPRG PKSLCNACGI RQRKARRAMA EAANGGNPTA VVLKTNKAII KPAATMKRKH  240
KEVVAATTAT TAAGGGGRRK LCVEDVKMGR RLNEIASTYQ RVFPQDEREA AILLMTLSYG  300
LLHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.14e-27GATA family protein