PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022967934.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 237aa    MW: 27126.6 Da    PI: 9.6789
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022967934.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.33.3e-30142199158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e  +k++  ++kpylheSRh hA+rR+Rg+ GrF
  XP_022967934.1 142 EEPVYVNAKQYHGILRRRQSRAKAEILNKISRSQKKPYLHESRHLHAMRRERGCRGRF 199
                     69*******************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MMSSKIDYRN GPDGYNSRPL WWLDAPTTFA ISKEDKVNWA RPNEPNGLVD NGPQPNTSTK  60
EVQETMTPPP YGESIVARQS KDASIVLPLM NNEHYQASTY ETIPTSYRYK DVYYGQLMPL  120
FGFQTLHNSE YTRMTLPLAT VEEPVYVNAK QYHGILRRRQ SRAKAEILNK ISRSQKKPYL  180
HESRHLHAMR RERGCRGRFI SKKKTAEPIA SMADDGKGSN MSSNCYQGSE LHLSAYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.14e-32NF-YA family protein