PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022967950.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

YABBY

Protein Properties

Length: 175aa MW: 19078.4 Da PI: 8.4986

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022967950.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	155.1	6e-48	9	159	1	163
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 +d+++ se++Cyv+CnfCnt+lav +P l+ +vtv+CGhC++l ++ + q + + l ++++ sn++++ ++++s XP_022967950.1 9 MDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCI------------DHPLSFQSQVGFSNNIRKGASTSS 91 578999***********************************9865444333333222............223333333333344444444444 PP YABBY 96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 ss++ s++ +e+p + v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + XP_022967950.1 92 SSSSSSSSSMANESPSANFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 159 4444446677888999999*********************************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MSSEDKASMD LVQPSEHLCY VKCNFCNTVL AVGIPCRRLL DTVTVKCGHC SNLSFLSTRP 60 PLQGQCIDHP LSFQSQVGFS NNIRKGASTS SSSSSSSSSS MANESPSANF VVKPPEKKHR 120 LPSAYNRFMK EEIQRIKAAN PEIPHREAFS AAAKNWARYI PNSVDGSASG THDNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	5e-65	YABBY family protein