PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022967998.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 491aa MW: 54694.5 Da PI: 9.2862

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022967998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	69.4	5.8e-22	193	246	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp++ Wt+ L +rF++a++ + G +kA+P++il++m+v gLt+e+v+SHLQkYR+ XP_022967998.1 193 KPKVIWTNSLRNRFLQAIKLI-GLDKAVPRKILDFMNVLGLTRENVASHLQKYRI 246 799**************99.******************************6 PP
2	Myb_DNA-binding	26.7	1.3e-08	198	245	4	48
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT + ++++a+k+ G + +++I m+ +g+t++++ s++qky+ XP_022967998.1 198 WTNSLRNRFLQAIKLIGLDkaVPRKILDFMNvLGLTRENVASHLQKYR 245 ***********************************************7 PP
3	Response_reg	47.2	1.2e-16	15	118	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + + ++ ++l+ ++ +v + +++ eal++l++++ +Dl+++D+ mp+++Gl+l k+ +e + v+t++ +++ +l+ l+ G XP_022967998.1 15 VLLVDDDATSLAVVSTMLRVCKC-QVVTLKNPMEALDTLRARKgfFDLLVTDLHMPQLSGLQLQKQVMQEF---KLSVITDE-KPSVILKSLEEG 104 89*******************.9999*******999999******************8866...67777855.58****** PP ESEEEESS--HHHH CS Response_reg 94 akdflsKpfdpeel 107 + + +Kp++ +++ XP_022967998.1 105 VAFYMVKPISLNDV 118 *******98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MGEVCEGVKF VDIHVLLVDD DATSLAVVST MLRVCKCQVV TLKNPMEALD TLRARKGFFD 60 LLVTDLHMPQ LSGLQLQKQV MQEFKLSVIT DEKPSVILKS LEEGVAFYMV KPISLNDVKH 120 VWQYAITPKK VSPDQTRTII PHELSIQIQK SSFKNSSSSP SCSRREIKSK SAEPKNKKAK 180 ESKVAKNSIG IRKPKVIWTN SLRNRFLQAI KLIGLDKAVP RKILDFMNVL GLTRENVASH 240 LQKYRIFLKR VAEKGARSIK IYCDSVLQIS NSAAAHVQYP LYRSKLQAQH PNFPQNQQLM 300 APLNNQSPTL GSLKQPTPQN PNLEGASMEN PLAHFWNQKY STLLTINKLN FPNFNGDQNF 360 VLVRNENPKC SSDGPGRTTG EDRMICSSRN GVCNVQASDD LNNGGSASVG SYFGQFEGTN 420 QPLPVVSNIN VETNVLVSSE EEVGNDNIWK AANESNAFGD IGEDQSYIDV LSDIFMGHND 480 TQTSLPVRFR T

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MGEVCEGVKF VDIHVLLVDD DATSLAVVST MLRVCKCQVV TLKNPMEALD TLRARKGFFD  60
LLVTDLHMPQ LSGLQLQKQV MQEFKLSVIT DEKPSVILKS LEEGVAFYMV KPISLNDVKH  120
VWQYAITPKK VSPDQTRTII PHELSIQIQK SSFKNSSSSP SCSRREIKSK SAEPKNKKAK  180
ESKVAKNSIG IRKPKVIWTN SLRNRFLQAI KLIGLDKAVP RKILDFMNVL GLTRENVASH  240
LQKYRIFLKR VAEKGARSIK IYCDSVLQIS NSAAAHVQYP LYRSKLQAQH PNFPQNQQLM  300
APLNNQSPTL GSLKQPTPQN PNLEGASMEN PLAHFWNQKY STLLTINKLN FPNFNGDQNF  360
VLVRNENPKC SSDGPGRTTG EDRMICSSRN GVCNVQASDD LNNGGSASVG SYFGQFEGTN  420
QPLPVVSNIN VETNVLVSSE EEVGNDNIWK AANESNAFGD IGEDQSYIDV LSDIFMGHND  480
TQTSLPVRFR T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58080.1	1e-32	ARR-B family protein