PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968027.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 344aa MW: 36700.1 Da PI: 7.0047

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968027.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.4	7.5e-36	76	181	2	106
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.....eaesssssasnsssg..k 89 ++k++++++hTkv+gR+RR+R++a caar+F+L++eL +++d++ti WLl+ a+pai+e+tgt++ +a ++ + + + + + XP_022968027.1 76 KPAKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVsvggtL----KIPTTSL--ArpN 164 5789************************************************************88888444221110....1111111..1222 PP TCP 90 aaksaakskksqksaas 106 a+ s+a++k++qk+a + XP_022968027.1 165 AEISEAPRKRRQKHAYA 181 22222222222222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MEEANQNHRV EEEEQEGTSN GCSETQTQTT VDSLNLVKAE ESLSSQPSDH QTAVSEHGLD 60 TSHPFSLFQI PSTRAKPAKR PSKDRHTKVE GRGRRIRMPA ACAARIFQLT RELDHKSDGE 120 TIRWLLEHAE PAIIEATGTG TVPAIAVSVG GTLKIPTTSL ARPNAEISEA PRKRRQKHAY 180 AESNNGNDQT SVSSGFTPIT PMAAYGAGIV PFWANAGGVA EQFFMVPGTL SNQQPQLWAV 240 PARPISNFVS SINPSLQFGG VVPVLARGGI TNCSNGMGSG SSPATICQSS IPVTMSAPST 300 SSAASSIGTT QMLRDFSMEI HEKKELELMG RPKPANSEAP CSKP

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MEEANQNHRV EEEEQEGTSN GCSETQTQTT VDSLNLVKAE ESLSSQPSDH QTAVSEHGLD  60
TSHPFSLFQI PSTRAKPAKR PSKDRHTKVE GRGRRIRMPA ACAARIFQLT RELDHKSDGE  120
TIRWLLEHAE PAIIEATGTG TVPAIAVSVG GTLKIPTTSL ARPNAEISEA PRKRRQKHAY  180
AESNNGNDQT SVSSGFTPIT PMAAYGAGIV PFWANAGGVA EQFFMVPGTL SNQQPQLWAV  240
PARPISNFVS SINPSLQFGG VVPVLARGGI TNCSNGMGSG SSPATICQSS IPVTMSAPST  300
SSAASSIGTT QMLRDFSMEI HEKKELELMG RPKPANSEAP CSKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	7e-61	TCP family protein