PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022968247.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 389aa    MW: 44680.3 Da    PI: 7.4046
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022968247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.6e-18206255154
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                     s+ykGVr+++ +g+W+AeIrd + +   r r++lg+++ aeeA +a++  r+++e
  XP_022968247.1 206 SKYKGVRQRP-WGKWAAEIRDpF-K---RSRVWLGTYDNAEEAFQAYESKRLQFE 255
                     89********.**********55.3...5********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MSALFILAVI GALLQLWFSS SAFFSLCCFW QRLILVQQSF SMLFRFKWTC SGVKFSWTFR  60
IKQFLLRFST LHFRCFDSQK SSIVSVRLFI NYSVLVLLNL SYYSLMPHPN QRSVSDRKFK  120
QSTNFSGDPK MRRKVRIICY DPDATDASSS EDEGEVYGRL RRRLNKKNRI IHEIDLPTPM  180
NAPESKSSKS SNNGNKYPQS RRLSSSKYKG VRQRPWGKWA AEIRDPFKRS RVWLGTYDNA  240
EEAFQAYESK RLQFEAMAAE MASGNGTVSD QTDSSVSTTE TTMSRTSPPS VLEWNDSSSQ  300
SREGDSIKEK TDTNMHYLQE ADLGNEFGWS LADGIGMFLD DFASLDNTHF FVFADADDEP  360
CFLPNFDCDH IWNAEISSWL DEPINITCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.11e-22ERF family protein