PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968419.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 350aa MW: 39492.8 Da PI: 7.8363

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.5	2.9e-35	78	168	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++++isw+++g++f+v+++ fa+++Lpk+Fkh+nf+SF+RQLn+YgF+kv +++ weF+++ F+kgkk+ll++ XP_022968419.1 78 FLSKTYQLVDDQTVDHVISWNDDGSTFIVWNTLAFARDLLPKHFKHNNFTSFLRQLNTYGFRKVVSDR---------WEFANECFRKGKKQLLCE 163 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_022968419.1 164 IQRRK 168 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MLVDGSKFRW VFSVMVPNFL YDFSVVSSSI STSSGFGTCL RSFRDLISLI LVPPLMEEPT 60 AKSASAGADS PRSVPTPFLS KTYQLVDDQT VDHVISWNDD GSTFIVWNTL AFARDLLPKH 120 FKHNNFTSFL RQLNTYGFRK VVSDRWEFAN ECFRKGKKQL LCEIQRRKLT TPVLTTASNS 180 VVLTAVGAPA IPSAHLLTGS SSGEEQVISS NLTPSKDLAE LIDENDKLKK EKVRLTEQLT 240 EVKSLCNNIF SLMSSFVENQ VKSSCKVRES VLTSAKSLDL FPVKRRSEED EAAEATEAET 300 YQIGSKRPRE YREDDTTLRL QPPERPKVKS DRIICEQKVD NEKTWHNQVH

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MLVDGSKFRW VFSVMVPNFL YDFSVVSSSI STSSGFGTCL RSFRDLISLI LVPPLMEEPT  60
AKSASAGADS PRSVPTPFLS KTYQLVDDQT VDHVISWNDD GSTFIVWNTL AFARDLLPKH  120
FKHNNFTSFL RQLNTYGFRK VVSDRWEFAN ECFRKGKKQL LCEIQRRKLT TPVLTTASNS  180
VVLTAVGAPA IPSAHLLTGS SSGEEQVISS NLTPSKDLAE LIDENDKLKK EKVRLTEQLT  240
EVKSLCNNIF SLMSSFVENQ VKSSCKVRES VLTSAKSLDL FPVKRRSEED EAAEATEAET  300
YQIGSKRPRE YREDDTTLRL QPPERPKVKS DRIICEQKVD NEKTWHNQVH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	3e-67	HSF family protein