PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968426.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 363aa MW: 40060.7 Da PI: 6.4593

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.8	2.3e-14	165	211	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L XP_022968426.1 165 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 211 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MRGEDQEQDH HQHQGECSQT IENMFQEQLL LHQLQNNNTD HIIYGDHHHH GAGRGLIFPG 60 DVVSPVLNSW PPLNPFLIPP PPPPPPPTSL CSSSSYGNLF NRRPANCLQF AYDGTSSADH 120 LGRIISTTLG PVVHHGSTAP FGLQAELGKM SAQEIMDAKA LAASKSHSEA ERRRRERINN 180 HLAKLRSLLP STTKTDKASL LAEVIQHVKE LKRQTSLIAE TSSIPTDIDE LTVDDASDEM 240 MINGAKFVIK ASLCCEDRSD LLPDLIKTLK SLRLRTLKAE ITTLGGRVRN VLFVTGEDDE 300 PSTDHNNNNN NNNNNNPNSD SQQQQHSISS IQEALKAVME KTGPDDSSSG NIKRQRTNNI 360 NIL

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MRGEDQEQDH HQHQGECSQT IENMFQEQLL LHQLQNNNTD HIIYGDHHHH GAGRGLIFPG  60
DVVSPVLNSW PPLNPFLIPP PPPPPPPTSL CSSSSYGNLF NRRPANCLQF AYDGTSSADH  120
LGRIISTTLG PVVHHGSTAP FGLQAELGKM SAQEIMDAKA LAASKSHSEA ERRRRERINN  180
HLAKLRSLLP STTKTDKASL LAEVIQHVKE LKRQTSLIAE TSSIPTDIDE LTVDDASDEM  240
MINGAKFVIK ASLCCEDRSD LLPDLIKTLK SLRLRTLKAE ITTLGGRVRN VLFVTGEDDE  300
PSTDHNNNNN NNNNNNPNSD SQQQQHSISS IQEALKAVME KTGPDDSSSG NIKRQRTNNI  360
NIL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	176	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	1e-77	bHLH family protein