PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968781.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YC

Protein Properties

Length: 253aa MW: 28103.5 Da PI: 6.4161

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968781.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	175.8	4.2e-55	74	177	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie++ dfknh+lPlarikki+kadedv+misaeaPvl+++ace+fileltlrsw h+eenkrrtl+k+diaaa+trtdifdfl XP_022968781.1 74 QLQAFWSNQyqeIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWSHTEENKRRTLQKNDIAAAITRTDIFDFL 168 89****99999****************************************************************************** PP NF-YC 93 vdivprdel 101 vdivpr++l XP_022968781.1 169 VDIVPREDL 177 ****987 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MDQQGQGQSP SMGAVGSGGQ IAYGSSSMYH PSQMTVGPTS GSQSTSQPSG AQLAQHQLAY 60 QHIHQQQQQQ LQQQLQAFWS NQYQEIERVI DFKNHSLPLA RIKKIMKADE DVRMISAEAP 120 VLFARACEMF ILELTLRSWS HTEENKRRTL QKNDIAAAIT RTDIFDFLVD IVPREDLKDE 180 ALTSIPRGSI TVGAPGDALP YCYMSSQHAS QAGTPGMIMG KPVMDPGSYA QQSHPYMPPQ 240 MWQHGQDRTP TDQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	153	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	1e-79	NF-YC family protein