PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968858.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 360aa MW: 40058.5 Da PI: 8.4682

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968858.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_022968858.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.3e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_022968858.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MFHPKKALSM NSHERGVCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DGMRASGLEL HRNTISSSNM 120 INRTMNEMQM EVQRRLHEQL EVQRHLQLRI EAQGKYMQSI LEKACQTLAG EDMAASGGYK 180 LMPGIPSNNN QQGVGDMGGG IKDFGTPLGF PSFQDLNLYG GHQLDLQQNV DGFMPHNDSL 240 LCLGKKKPRP PANYGSGKYA LDWPDDLRLQ GIGMPQQADH EFKDISIGAT LAERGHLEEM 300 YEAKPVGSDE SMLGDHRKYD TNDNASLKLQ RPSPRRAPLS AETVNQSLTS APQVTLSPFG

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MFHPKKALSM NSHERGVCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DGMRASGLEL HRNTISSSNM  120
INRTMNEMQM EVQRRLHEQL EVQRHLQLRI EAQGKYMQSI LEKACQTLAG EDMAASGGYK  180
LMPGIPSNNN QQGVGDMGGG IKDFGTPLGF PSFQDLNLYG GHQLDLQQNV DGFMPHNDSL  240
LCLGKKKPRP PANYGSGKYA LDWPDDLRLQ GIGMPQQADH EFKDISIGAT LAERGHLEEM  300
YEAKPVGSDE SMLGDHRKYD TNDNASLKLQ RPSPRRAPLS AETVNQSLTS APQVTLSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-115	G2-like family protein