PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022969400.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 146aa    MW: 15852.3 Da    PI: 8.7865
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022969400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260119.32.2e-3761061101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++Cv+apyfpa++p+k   vh++FGasnv+kll++l e++r+da+s +vyeA+ar+rd v+G+vg+i  lq+q++ l+++la
  XP_022969400.1   6 PCAACKLLRRRCAQHCVFAPYFPAHHPHKCSSVHEVFGASNVSKLLQELGEHQRSDAVSWMVYEANARIRDQVNGCVGTIACLQRQVDALQQKLA 100
                     7********************************************************************************************** PP

          DUF260  96 llkeel 101
                      ++++l
  XP_022969400.1 101 ITQAQL 106
                     *99885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MGAATPCAAC KLLRRRCAQH CVFAPYFPAH HPHKCSSVHE VFGASNVSKL LQELGEHQRS  60
DAVSWMVYEA NARIRDQVNG CVGTIACLQR QVDALQQKLA ITQAQLLQLK MAQFSSAKSS  120
SVGNLLLPPL PNININVGAS PSLWSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.12e-48LBD family protein