PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022969619.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 586aa MW: 63196.7 Da PI: 6.1375

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022969619.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.5	6.7e-15	353	399	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L + +eY+k Lq XP_022969619.1 353 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEGIEYLKTLQ 399 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MPLSELYRVA RGKNNMVSAD SSLNPENDVY ELVWENGQIL LQGQSSKARK NSCVPFHSPK 60 GTDSVIRDVL GHDDDDDDDM VPWLNYPLDE HSSEFLLELS GVTVNDPLSR NSSSKQVDGD 120 AQLNHLHGAR LEDGNISKLS SMDVSSARAR SCTNQLHSSA SQQSQISLPH RSSSSTARHN 180 SSNIMNFSHF LRPAVLKSND QNRDVTKAVG LSSMRCVGSM DKNCSAVVPS IDDSNPSDVK 240 APETLEVVEQ PEVACLGDSA KNDDRPEPCL EAGASKGLSD SEKVVESVIA ASVCSRTSMK 300 RALDDTTVLR KRKCHDNEDS EWHSDDVEEE SNDMKRATPA RGNGSKRSRA AEVHNLSERR 360 RRDRINEKMR ALQELIPNCN KVDKASMLDE GIEYLKTLQL QVQIMSMGAG LFMPPMMFPG 420 GMPPMNAPHI YSPMGVGIGM GFGIAMPDMN GGSPGYPMAQ MPHLQGTHFP SPSIPAQTIM 480 HGMPGSNFHV LGFPGQGLPV SMPRGPIAPF HGGPFMTNSS VAVAPVESFS LAAACSSKDS 540 PPKMNSPTVR NGGNDPLITA PRQGNKQASG VNGSGTNPTN NNETTL

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MPLSELYRVA RGKNNMVSAD SSLNPENDVY ELVWENGQIL LQGQSSKARK NSCVPFHSPK  60
GTDSVIRDVL GHDDDDDDDM VPWLNYPLDE HSSEFLLELS GVTVNDPLSR NSSSKQVDGD  120
AQLNHLHGAR LEDGNISKLS SMDVSSARAR SCTNQLHSSA SQQSQISLPH RSSSSTARHN  180
SSNIMNFSHF LRPAVLKSND QNRDVTKAVG LSSMRCVGSM DKNCSAVVPS IDDSNPSDVK  240
APETLEVVEQ PEVACLGDSA KNDDRPEPCL EAGASKGLSD SEKVVESVIA ASVCSRTSMK  300
RALDDTTVLR KRKCHDNEDS EWHSDDVEEE SNDMKRATPA RGNGSKRSRA AEVHNLSERR  360
RRDRINEKMR ALQELIPNCN KVDKASMLDE GIEYLKTLQL QVQIMSMGAG LFMPPMMFPG  420
GMPPMNAPHI YSPMGVGIGM GFGIAMPDMN GGSPGYPMAQ MPHLQGTHFP SPSIPAQTIM  480
HGMPGSNFHV LGFPGQGLPV SMPRGPIAPF HGGPFMTNSS VAVAPVESFS LAAACSSKDS  540
PPKMNSPTVR NGGNDPLITA PRQGNKQASG VNGSGTNPTN NNETTL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	358	363	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	7e-56	bHLH family protein