PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022969622.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 257aa MW: 29339.1 Da PI: 7.8572

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022969622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	4e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl XP_022969622.1 14 KGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	41.9	2.3e-13	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++ E++l+++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_022969622.1 67 RGPFSQPEEDLIIELHSVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MGRYSCCYKQ KLRKGLWSPE EDEKLLNHIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LKPDLKRGPF SQPEEDLIIE LHSVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLKQKG 120 IDPNTHKPYV DKEISNENNN NITILDDKKI HEKASSIEVV PNHSSSDMST TTDKSENMGI 180 AITIPNNNTN PFEAISNLLF PTPNSCENPP ISSNAFSWQP DELLQTASDL MRSDWYHQIN 240 HHHPTLQPEL LGHQTYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	8e-85	MYB family protein