PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022970177.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 245aa    MW: 26152.4 Da    PI: 4.4015
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022970177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-1773122155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+G+r ++ +g+Wv+eIr+p++   +kr++lg+f tae+Aa+a++ a+++l+g
  XP_022970177.1  73 SLYRGIR-CR-SGKWVSEIREPRK---TKRIWLGTFPTAEMAAAAYDVAALALRG 122
                     579***9.55.6*********843...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MGDQKLPMNE LSQTPIDPFV PSVPTSQNPN PNPNPNTQEA EPRALVQELP PPPPSSMASS  60
ITSSSSSSTK KHSLYRGIRC RSGKWVSEIR EPRKTKRIWL GTFPTAEMAA AAYDVAALAL  120
RGGDAVLNFP ASIPSYPIPA STSPIDIRAA ASTAAAASAA NALKKAEGAC SNIEDTKIIT  180
VEDCSNTTLL KTEEFVDEEE IFSMPSLLAD MAEGMMVSPP RINSPPPSDD SMENSDGTES  240
LWSYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-33ERF family protein