PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022970270.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 517aa MW: 57649.3 Da PI: 7.3182

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022970270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.9	9.5e-08	395	443	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +l+++v ++G g+W+ I r +Rt ++k++w+++l XP_022970270.1 395 SWTLSEVMKLIEGVSEYGVGRWTEIKRLQFsssSHRTSVDLKDKWRNLL 443 5**********************876558999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPVPEDDV LGVEHFLEPE INKCFSGSVL 60 DFNTFHSHKC LGIEPFSFAV DFDHIKIDSE SLHSSLTLEG ERTKQEDHDG KLHGADDVCS 120 GSNKLLGTAN SRTTDDIFNL APGSSNASFL GHVDFGSCSQ GFCTTDIGVD LSFTGGYNVV 180 FDQKEGKLMI SSSTGSSGCS GSATACLDDE NMSDYRPVKR KRLSSCSSSK TNSEHNESRI 240 VLFNEGSRGD TLVTEKRLRK PPRRYSEESV EQKSRSNSKK SAPRASKDKS RPSESHKQQW 300 QKKLKAAPVV YKDKSFNGGC IQVPFGLPIE ESHSAKKIIC WEPEEIKENR ILCIKDKNDV 360 ESFSAESEDE NTEDECATKV YNAQKGNSRR KHHISWTLSE VMKLIEGVSE YGVGRWTEIK 420 RLQFSSSSHR TSVDLKDKWR NLLKASDTQL QNRRKVVVGR KQTSQQVPES VLCRVRELAA 480 IYPYPRENKS KNLYSAPSSS SSKSTANNML ISLPTVM

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPVPEDDV LGVEHFLEPE INKCFSGSVL  60
DFNTFHSHKC LGIEPFSFAV DFDHIKIDSE SLHSSLTLEG ERTKQEDHDG KLHGADDVCS  120
GSNKLLGTAN SRTTDDIFNL APGSSNASFL GHVDFGSCSQ GFCTTDIGVD LSFTGGYNVV  180
FDQKEGKLMI SSSTGSSGCS GSATACLDDE NMSDYRPVKR KRLSSCSSSK TNSEHNESRI  240
VLFNEGSRGD TLVTEKRLRK PPRRYSEESV EQKSRSNSKK SAPRASKDKS RPSESHKQQW  300
QKKLKAAPVV YKDKSFNGGC IQVPFGLPIE ESHSAKKIIC WEPEEIKENR ILCIKDKNDV  360
ESFSAESEDE NTEDECATKV YNAQKGNSRR KHHISWTLSE VMKLIEGVSE YGVGRWTEIK  420
RLQFSSSSHR TSVDLKDKWR NLLKASDTQL QNRRKVVVGR KQTSQQVPES VLCRVRELAA  480
IYPYPRENKS KNLYSAPSSS SSKSTANNML ISLPTVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	3e-31	MYB_related family protein