PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022970500.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 192aa    MW: 22315.2 Da    PI: 6.6305
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022970500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding544e-174388148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+ T+ E+ l++d++ ++G++ W++Iar+++ gRt++++k++w++++
   XP_022970500.1 43 RGKITPHEERLILDLHSKWGNR-WSRIARKLP-GRTDNEIKNFWRTHM 88
                     8999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MGFHRQSIRF EGGGRLQVLL GLKRTGKSCR LRWVNYLHPG LKRGKITPHE ERLILDLHSK  60
WGNRWSRIAR KLPGRTDNEI KNFWRTHMRK VVKAASHDHV VVSPSSSAQI IEIGEELLDR  120
REEEEDGYSM DDIWRDIDDQ SNVINQVCDQ SNFECGPMSM SMPPWDYGEY SPWTVVEEEN  180
KVFDYGEAVA LS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.25e-55MYB_related family protein