PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022970639.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 479aa    MW: 53274.4 Da    PI: 8.9639
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022970639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.13.8e-33144201260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     dDgynWrKYGqK+vkgse+prsYY+Ct+++C++kkkvers  d++++ei+Y+g+Hnh+k
  XP_022970639.1 144 DDGYNWRKYGQKQVKGSENPRSYYKCTFPSCSTKKKVERSL-DGQITEIVYKGSHNHPK 201
                     8****************************************.***************85 PP
2WRKY1062e-33317375159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d+++v++tYeg+Hnh+
  XP_022970639.1 317 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDQRAVITTYEGKHNHD 375
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    
MFIKFLLGAG LLFLQQDRSP LPSPTTGSFP SQSLNWKSSY GYNQQSIKEE NKYLSNFSFQ  60
TQSSKPPPSS FQPSSTTAPM SWSFQEQGKK QDGFPSENNM VKQSFSPEYG IVQNQSQING  120
GGQLQSDYGN NYPQQSQTVN RRSDDGYNWR KYGQKQVKGS ENPRSYYKCT FPSCSTKKKV  180
ERSLDGQITE IVYKGSHNHP KPQSTRRSSL SSAGSSLSMV VSNPATNEMA DQSFTTQGSA  240
QFDGVATPEN SSISIGDDDF DRSSQKSKSG GDDYDEVEPE AKRWRRDENN EGMSAAGSRT  300
VREPRVVVQT TSDIDILDDG YRWRKYGQKV VKGNPNPRSY YKCTNPGCPV RKHVERASHD  360
QRAVITTYEG KHNHDVPPAR GSGSHSLSRA FPNNDPPATA IRPSAVAHQS NNGGHQSLQT  420
AFAVEMVQNP HGFSFPEFGN SMGMGSGSYM NQNQPNHNLF PRAKEEPRDH DMFIQSLLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-108WRKY family protein