PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022970835.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 323aa    MW: 36856.7 Da    PI: 4.5643
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022970835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.85.8e-141663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++ Ed  l+  ++ +G ++W++ ++  g+ R++k+c++rw +yl
   XP_022970835.1 16 RGPWSPAEDFSLITFIQNHGHDNWRALPKQAGLLRCGKSCRLRWINYL 63
                     89******************************99************97 PP
2Myb_DNA-binding53.26.9e-1769114148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T++E+e +++++k +G++ W++Ia++++ gRt++++k+ w+++l
   XP_022970835.1  69 RGNFTQDEEETIIKLHKTWGNK-WSKIASRLP-GRTDNEIKNVWNTHL 114
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MGKGRAPCCD KNEVKRGPWS PAEDFSLITF IQNHGHDNWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDVKRG NFTQDEEETI IKLHKTWGNK WSKIASRLPG RTDNEIKNVW NTHLKKRLPP  120
TNKVSDSSED EPKESRTASS LSSSSVLFSN ENQNLETEPL NKSNPINDNL VCSKQQTTSA  180
SVSSNSISSS QVEGCWAQNG VDFGEEVKEK KENDDDEEEM GSKSNDMGIK IPLESDIEFW  240
DMLDLDNIHL FESEEVDQSY CEGSNFVVQK NREFENDEWF KYLENELGLN RPPEADDITA  300
AERFSVDVDP CMAYFAEGFT RQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79180.12e-73MYB family protein