PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022970837.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 426aa MW: 47016.4 Da PI: 4.7932

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022970837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31	4.6e-10	229	276	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_022970837.1 229 SHSLAERARREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 276 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MNRALPEMSN TAENCVDTLT VLERQRARFK WQQDQLLYQQ QQLQSFNGMM DYGAGFPPSD 60 HLTGFPGFMS AAGAGGDGGL SLVEMVMGAV KPDPGLEDGW SDPSLLLNPP TAYELNSSLS 120 RTSSCPPAVN PAAAAGRESF KKRKAEKVQN PINNKEKRIK ASSEEEKEEE EEEELSKTTD 180 QNSTKNNNST ITTTTNNNRE TSADTSKASE VKKPDYIHVR ARRGQATDSH SLAERARREK 240 ISERMKYLQD LVPGCNKITG KAGMLDEIIN YVQSLQRQVE FLSMKLAAVN PRLDFNVDDL 300 FLKEVFPPPC TTANFAAIGG ISSEITDPSS YFQFNRNNQQ IVPCCGLEMG INTSDVALRR 360 TISAPVSFPE NFLDSSCLTQ FQGSSGWDVD LQNLYNVGFD QGRSSNAFSS QPYTGSMEGS 420 NLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MNRALPEMSN TAENCVDTLT VLERQRARFK WQQDQLLYQQ QQLQSFNGMM DYGAGFPPSD  60
HLTGFPGFMS AAGAGGDGGL SLVEMVMGAV KPDPGLEDGW SDPSLLLNPP TAYELNSSLS  120
RTSSCPPAVN PAAAAGRESF KKRKAEKVQN PINNKEKRIK ASSEEEKEEE EEEELSKTTD  180
QNSTKNNNST ITTTTNNNRE TSADTSKASE VKKPDYIHVR ARRGQATDSH SLAERARREK  240
ISERMKYLQD LVPGCNKITG KAGMLDEIIN YVQSLQRQVE FLSMKLAAVN PRLDFNVDDL  300
FLKEVFPPPC TTANFAAIGG ISSEITDPSS YFQFNRNNQQ IVPCCGLEMG INTSDVALRR  360
TISAPVSFPE NFLDSSCLTQ FQGSSGWDVD LQNLYNVGFD QGRSSNAFSS QPYTGSMEGS  420
NLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	3e-58	bHLH family protein