PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022970969.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 373aa MW: 42031.2 Da PI: 7.0467

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022970969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.9e-17	73	120	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv +++++G+g+W+++++ g+ R+ k+c++rw +yl XP_022970969.1 73 KGPWTPEEDIVLVSYIQEHGPGNWRAVPANTGLLRCSKSCRLRWTNYL 120 79****************************99**********97 PP
2	Myb_DNA-binding	50.5	4.9e-16	126	171	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++ ++++ ++lG++ W++Ia++++ Rt++++k++w++yl XP_022970969.1 126 RGNFTHHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNHWNTYL 171 89******************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MEWLCQTLMP PLTPSSPPHL LHISKSASQS FYLYTPRQPA IPHFSLLNQH TNLLSLHFQM 60 GRPPCCDKQG VKKGPWTPEE DIVLVSYIQE HGPGNWRAVP ANTGLLRCSK SCRLRWTNYL 120 RPGIKRGNFT HHEEKMIIHL QALLGNRWAA IASYLPQRTD NDIKNHWNTY LKKKLNNNNH 180 HHHHPSPATD LSAAGGGDAR GQWERRLQTD IQMAKQALSD ALSPETSKPP PPPPPPKPVD 240 PKTPHHQIPT YASSADNIAR WLKEWNKNSP GNNRRRSSSP PAMESGNFGG EHGGGIKEVG 300 LSESIESFLG FDSFESSNSD LSPETSVFQG ESETDESEEL LPMELLEKWL HEDSKDYYFS 360 DIIADEKLKC DLL

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MEWLCQTLMP PLTPSSPPHL LHISKSASQS FYLYTPRQPA IPHFSLLNQH TNLLSLHFQM  60
GRPPCCDKQG VKKGPWTPEE DIVLVSYIQE HGPGNWRAVP ANTGLLRCSK SCRLRWTNYL  120
RPGIKRGNFT HHEEKMIIHL QALLGNRWAA IASYLPQRTD NDIKNHWNTY LKKKLNNNNH  180
HHHHPSPATD LSAAGGGDAR GQWERRLQTD IQMAKQALSD ALSPETSKPP PPPPPPKPVD  240
PKTPHHQIPT YASSADNIAR WLKEWNKNSP GNNRRRSSSP PAMESGNFGG EHGGGIKEVG  300
LSESIESFLG FDSFESSNSD LSPETSVFQG ESETDESEEL LPMELLEKWL HEDSKDYYFS  360
DIIADEKLKC DLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28910.1	4e-92	MYB family protein