PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022971504.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 365aa MW: 39212.9 Da PI: 8.5678

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022971504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	139.3	1.1e-43	92	167	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y++rhkvC++hsk+p+v+v+g+eqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_022971504.1 92 RCQVEGCKVDLSDAKAYYSRHKVCTMHSKSPKVIVAGIEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 167 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MRFRGFFFIV LMEMDCSSLT ESGGSTTSSP PISSAESLNG LKFGHKIYFE DVGIGELPKS 60 GGGSFSSSAV IASTPTKKPR GGGVVQAAQP PRCQVEGCKV DLSDAKAYYS RHKVCTMHSK 120 SPKVIVAGIE QRFCQQCSRF HQLPEFDQGK RSCRRRLAGH NERRRKPPPG SLLSTRYGRF 180 SSSILENSSR VGSFLMDFSA YPKLTGKTSE RVPGSQNITA MGSYIPYPWQ SNSENSPPEL 240 FLPVSAGPGN EVTDSSCALS LLSNQTSALD VNALLNAEGA LVAQTATAHA AAADHFSTVS 300 WGFKGNEAAA SSSSSLDLPS DLGLNHHGLT SDVQFVSHQG RRPYMELGHS GAFDSATQHQ 360 LHWSL

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MRFRGFFFIV LMEMDCSSLT ESGGSTTSSP PISSAESLNG LKFGHKIYFE DVGIGELPKS  60
GGGSFSSSAV IASTPTKKPR GGGVVQAAQP PRCQVEGCKV DLSDAKAYYS RHKVCTMHSK  120
SPKVIVAGIE QRFCQQCSRF HQLPEFDQGK RSCRRRLAGH NERRRKPPPG SLLSTRYGRF  180
SSSILENSSR VGSFLMDFSA YPKLTGKTSE RVPGSQNITA MGSYIPYPWQ SNSENSPPEL  240
FLPVSAGPGN EVTDSSCALS LLSNQTSALD VNALLNAEGA LVAQTATAHA AAADHFSTVS  300
WGFKGNEAAA SSSSSLDLPS DLGLNHHGLT SDVQFVSHQG RRPYMELGHS GAFDSATQHQ  360
LHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57920.1	2e-54	SBP family protein