PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022971708.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 299aa    MW: 34667.1 Da    PI: 9.8827
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022971708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.73.2e-1628121299
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
                     fk+   +++lk++ l +pkkf+ e+g+k  e+   +l+  +g++Wev +  +k++gr+++  GW++Fv+  ++    f+vFk++ r s+f  +v 
  XP_022971708.1  28 FKIV-LAHALKEQKLEIPKKFVGEYGLKAFENNPTRLKVADGEEWEVGV--TKSDGRVWFDYGWQKFVEFYNVGLEYFLVFKYELRsSCF--HVV 117
                     4544.367888888***********9999999999**************..*********************************666999..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f+ 
  XP_022971708.1 118 IFDP 121
                     9985 PP
2B366.24.9e-21201297498
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..E CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelv 93 
                     +  ps+  + + l +p++fae+h +   e++++tl+d++gr+W v++ +y   k ++r+ l++GW++F  +n+Lk+ Df+vF+++++  ++  ++
  XP_022971708.1 201 KIYPSHIQSGAYLNVPRRFAERHIE---EPTEMTLQDLDGRTWGVTYySYltPKMKRRVELRSGWRKFFVDNDLKVADFCVFEMISKnsTTIAFK 292
                     56799999999************43...4678***************44497666677*************************995513444455 PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     v +fr
  XP_022971708.1 293 VDIFR 297
                     66665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MSKFLQQQLP AMASSSQLCK APDNPHFFKI VLAHALKEQK LEIPKKFVGE YGLKAFENNP  60
TRLKVADGEE WEVGVTKSDG RVWFDYGWQK FVEFYNVGLE YFLVFKYELR SSCFHVVIFD  120
PTATEIKYPL KKKLKMGTNF DDLHLISHPH PQVGKASFGA MELMNNKRKL RLMTRTSERA  180
GAMAKATTFQ SMTPNPSFMC KIYPSHIQSG AYLNVPRRFA ERHIEEPTEM TLQDLDGRTW  240
GVTYYSYLTP KMKRRVELRS GWRKFFVDND LKVADFCVFE MISKNSTTIA FKVDIFRAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130136LKKKLKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-19B3 family protein