PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022971709.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 287aa    MW: 33322.5 Da    PI: 9.8164
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022971709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.31.6e-14291091699
                     EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
              B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                       +pkkf+ e+g+k  e+   +l+  +g++Wev +  +k++gr+++  GW++Fv+  ++    f+vFk++ r s+f  +v +f+ 
  XP_022971709.1  29 KEIPKKFVGEYGLKAFENNPTRLKVADGEEWEVGV--TKSDGRVWFDYGWQKFVEFYNVGLEYFLVFKYELRsSCF--HVVIFDP 109
                     569********9999999999**************..*********************************666999..9999985 PP
2B366.34.5e-21189285498
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..E CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelv 93 
                     +  ps+  + + l +p++fae+h +   e++++tl+d++gr+W v++ +y   k ++r+ l++GW++F  +n+Lk+ Df+vF+++++  ++  ++
  XP_022971709.1 189 KIYPSHIQSGAYLNVPRRFAERHIE---EPTEMTLQDLDGRTWGVTYySYltPKMKRRVELRSGWRKFFVDNDLKVADFCVFEMISKnsTTIAFK 280
                     56799999999************43...4678***************44497666677*************************995513444455 PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     v +fr
  XP_022971709.1 281 VDIFR 285
                     66665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MSKFLQQQLP AMASSSQLCK APDNPHFFKE IPKKFVGEYG LKAFENNPTR LKVADGEEWE  60
VGVTKSDGRV WFDYGWQKFV EFYNVGLEYF LVFKYELRSS CFHVVIFDPT ATEIKYPLKK  120
KLKMGTNFDD LHLISHPHPQ VGKASFGAME LMNNKRKLRL MTRTSERAGA MAKATTFQSM  180
TPNPSFMCKI YPSHIQSGAY LNVPRRFAER HIEEPTEMTL QDLDGRTWGV TYYSYLTPKM  240
KRRVELRSGW RKFFVDNDLK VADFCVFEMI SKNSTTIAFK VDIFRAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118124LKKKLKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31680.15e-16B3 family protein