PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022971710.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 245aa    MW: 28074.4 Da    PI: 8.7129
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022971710.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3681.4e-2112104199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv +p    +s+ l +p kf+++hg+   e+ +++l+  sg +W+v l  +k++++++++kGW+eFvk   ++ g f++F+++g+s+f  +v 
  XP_022971710.1  12 FFKVILPQTLIQSK-LAIPHKFVRKHGEA-LETEEVRLKVASGAEWKVGL--TKNDEKIWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCF--HVV 100
                     88999999988887.***********654.46679***************..**************************************..**9 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f+k
  XP_022971710.1 101 IFDK 104
                     9998 PP
2B354.71.8e-171562411399
                     TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkl..iyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     ++ l++p  fa++h+++   +k++ +e ++gr+W++ +  ++  + +r+ +++GW++F+++ngLk gD++vF+l+++se +++ ++fr+
  XP_022971710.1 156 KSYLSIPLWFANAHMES---PKEMNVEVSDGRVWKILCgeRWPLGVKRVEMRGGWRDFARDNGLKKGDICVFELMETSELSFKATIFRS 241
                     3569********99744...678***************766656666799*************************99999999999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MASSFESATP HFFKVILPQT LIQSKLAIPH KFVRKHGEAL ETEEVRLKVA SGAEWKVGLT  60
KNDEKIWFEK GWEEFVKFYS VEIGHFLTFR YEGNSCFHVV IFDKTASEIE YPLGCGGKVK  120
KRERFSITEE ATKFQSLTMN PSFMVTMGAS YLHTGKSYLS IPLWFANAHM ESPKEMNVEV  180
SDGRVWKILC GERWPLGVKR VEMRGGWRDF ARDNGLKKGD ICVFELMETS ELSFKATIFR  240
SGCRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-27B3 family protein