PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022971808.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 492aa MW: 55822.5 Da PI: 5.8645

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022971808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	45.8	1.4e-14	194	245	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r++W+ e ++F +a+++LG +k Pk il+lm+ ++Ltl +v+ HLQkY+ XP_022971808.1 194 SRVVWNVERRRKFSDALNKLG--DKCRPKLILKLMNEPSLTLRQVANHLQKYKA 245 79****************5..889************************85 PP
2	Myb_DNA-binding	26.1	1.9e-08	197	244	3	48
SS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 W e ++ da ++lG + ++k+I + m+ +tl q+ +++qky+ XP_022971808.1 197 VWNVERRRKFSDALNKLGDKcRPKLILKLMNePSLTLRQVANHLQKYK 244 677777789*******99*************************7 PP
3	Response_reg	21.8	9.3e-09	3	58	50	107
ESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS Response_reg 50 DiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107 ++mp+md + +l + + + + +i++++ + + a++al Ga fl Kp+++++l XP_022971808.1 3 NVSMPDMDSFSFLHVLLKMK--IVVIFMSSVMNLDVATKALAEGACYFLQKPISKDDL 58 589***********8855..*******************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MANVSMPDMD SFSFLHVLLK MKIVVIFMSS VMNLDVATKA LAEGACYFLQ KPISKDDLKY 60 VWQHVYRRNR NISKLNHEAN CVEKAKYGKE SVGIQNDDTV VLSQPTDEVS INNNGSINYQ 120 LMSYKEEGQN QPTNSHDTLV ASYFEGKRLM DDIEGTSKEK RVIYYSTPTN FGDTRIDEDN 180 RRMKEYYISS DNRSRVVWNV ERRRKFSDAL NKLGDKCRPK LILKLMNEPS LTLRQVANHL 240 QKYKAQVESM KKGRENKLAP RREASKFNFS VRTQLPLPLV PKHPHDEANS STKGSLTSFI 300 GGERFRLIAP KPVPSPKLPV SANFANHGLI MLGQNFQPVD SNYNSVPYII NQTTPKVTSS 360 CVFDETQFSD NHLDVVQQDL TTFKIENQEA MGCNGTSEGI QLMSNNMAFP DSTNLDNIAA 420 NFGNEGSQQQ SAEFDYLLNF LEDDPHEFDS DLNLSDVDKY SEWLKNTVLE NRSGPDSFLG 480 DSAENFSTEN TQ

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MANVSMPDMD SFSFLHVLLK MKIVVIFMSS VMNLDVATKA LAEGACYFLQ KPISKDDLKY  60
VWQHVYRRNR NISKLNHEAN CVEKAKYGKE SVGIQNDDTV VLSQPTDEVS INNNGSINYQ  120
LMSYKEEGQN QPTNSHDTLV ASYFEGKRLM DDIEGTSKEK RVIYYSTPTN FGDTRIDEDN  180
RRMKEYYISS DNRSRVVWNV ERRRKFSDAL NKLGDKCRPK LILKLMNEPS LTLRQVANHL  240
QKYKAQVESM KKGRENKLAP RREASKFNFS VRTQLPLPLV PKHPHDEANS STKGSLTSFI  300
GGERFRLIAP KPVPSPKLPV SANFANHGLI MLGQNFQPVD SNYNSVPYII NQTTPKVTSS  360
CVFDETQFSD NHLDVVQQDL TTFKIENQEA MGCNGTSEGI QLMSNNMAFP DSTNLDNIAA  420
NFGNEGSQQQ SAEFDYLLNF LEDDPHEFDS DLNLSDVDKY SEWLKNTVLE NRSGPDSFLG  480
DSAENFSTEN TQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	201	206	ERRRKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	9e-27	ARR-B family protein