PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022972035.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family FAR1
Protein Properties Length: 252aa    MW: 28968.6 Da    PI: 6.9588
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022972035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR191.98.1e-2988175291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+s+ ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  XP_022972035.1  88 FYNAYATRVGFVIRVSRLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKITSGKWVVTKFVKEHTHPLSP 175
                     ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEVEFGVDGD SEVVGNSTLV EDSKPLDENE TGVSSIERIF DHDRDEKIIQ DSSGRNAILD  60
SVPGLPVVQG DEPYIGQEFE NEAAAHAFYN AYATRVGFVI RVSRLSRSRR DGTAIGRALV  120
CNKEGYRMPD KREKIVRQRA ETRVGCRAMI LVRKITSGKW VVTKFVKEHT HPLSPGKSRR  180
DCIYDQYPNE HDKIRELSQQ LAVEKKRSAT YKRHLEVIFE YIEEHNNNLS RKIQHIVDNV  240
KEMENIEQQN LR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.24e-88FAR1 family protein