PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972195.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 303aa MW: 33611 Da PI: 5.0197

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972195.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.6	2.9e-18	25	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl XP_022972195.1 25 RGPWTVEEDIALINYIANHGDGRWNLLARCAGLKRTGKSCRLRWLNYL 72 89********************************************97 PP
2	Myb_DNA-binding	52.2	1.4e-16	78	121	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_022972195.1 78 RGNITLEEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 121 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MDGNKDRQID SGNFQGGDDD GDLRRGPWTV EEDIALINYI ANHGDGRWNL LARCAGLKRT 60 GKSCRLRWLN YLRPDVRRGN ITLEEQLLIL DLHSRWGNRW SKIAQHLPGR TDNEIKNYWR 120 TRVQKHAKQL KCDVNSKQFK DTMRYLWIPR LVERIQASAA ATTAVDGNGS YGSVAPPLMN 180 NGSDFVSTSQ VTPSYASENS SSGGGSSDGT QGSSVSELTD CYNNFGCFSV GYGQDTAPPP 240 PPPPPMQSSA VGFFNEGELD FQAMEQSSCE WLAEDGGVDT SENFWSTAGP GTDYFWLLQQ 300 HLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	4e-84	MYB family protein