PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972197.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 483aa MW: 52423.5 Da PI: 8.2128

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.4	2.9e-09	324	371	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_022972197.1 324 SHSLAERVRREKISKRMKFLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 371 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MEKEFFMNDG SSFYGMDSSV LFNPNWENSM DQSDLFESTL SSIVSSPANS HAGAVIGGGN 60 GGGGGGGGDN LMMRELIGRL GSICSSGEIS PHSYIGGTNN NSTNTSCYNT PLNSPPMKGN 120 LSVGHRQNLA PFSADPGFAE RTARFSCFGN KNLAVNGQLC SNETQELSNK SMAGAGVESG 180 KLSRVSSNKS FNVSGIGSQM GVQKGNSMAN KKVMNRFSRS STPENDDSRE GSSVSEQITA 240 GELGFKVNTR KTKSAQTGEA KNVKAAGENH KPNGKKIKPE MDAAKGKAEA KDATQKQNND 300 NSKPPEPPKD YIHVRAKRGQ ATDSHSLAER VRREKISKRM KFLQDLVPGC NKITGKAVML 360 DEIINYVQSL QHQVEFLSMK LATVNPRMDF NMETLLPKDI FKGSSSLPHT IYPIDSSVPT 420 FAYEYQSMNI PPLHSDQTQG GYHEMGNGIQ ISKFWEDELH SVVQMGYGQT QLQNPRDEMK 480 SEL

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MEKEFFMNDG SSFYGMDSSV LFNPNWENSM DQSDLFESTL SSIVSSPANS HAGAVIGGGN  60
GGGGGGGGDN LMMRELIGRL GSICSSGEIS PHSYIGGTNN NSTNTSCYNT PLNSPPMKGN  120
LSVGHRQNLA PFSADPGFAE RTARFSCFGN KNLAVNGQLC SNETQELSNK SMAGAGVESG  180
KLSRVSSNKS FNVSGIGSQM GVQKGNSMAN KKVMNRFSRS STPENDDSRE GSSVSEQITA  240
GELGFKVNTR KTKSAQTGEA KNVKAAGENH KPNGKKIKPE MDAAKGKAEA KDATQKQNND  300
NSKPPEPPKD YIHVRAKRGQ ATDSHSLAER VRREKISKRM KFLQDLVPGC NKITGKAVML  360
DEIINYVQSL QHQVEFLSMK LATVNPRMDF NMETLLPKDI FKGSSSLPHT IYPIDSSVPT  420
FAYEYQSMNI PPLHSDQTQG GYHEMGNGIQ ISKFWEDELH SVVQMGYGQT QLQNPRDEMK  480
SEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	8e-83	bHLH family protein