PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972198.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 433aa MW: 47182.8 Da PI: 8.308

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.7	2.5e-09	274	321	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_022972198.1 274 SHSLAERVRREKISKRMKFLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 321 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MEKEFFMNDG SSFYGMDSSV LFNPNWENSM DQSDLFESTL SSIVSSPANS HAGAVIGGGN 60 GGGGGGGGDN LMMRELIGRL GSICSSGFAE RTARFSCFGN KNLAVNGQLC SNETQELSNK 120 SMAGAGVESG KLSRVSSNKS FNVSGIGSQM GVQKGNSMAN KKVMNRFSRS STPENDDSRE 180 GSSVSEQITA GELGFKVNTR KTKSAQTGEA KNVKAAGENH KPNGKKIKPE MDAAKGKAEA 240 KDATQKQNND NSKPPEPPKD YIHVRAKRGQ ATDSHSLAER VRREKISKRM KFLQDLVPGC 300 NKITGKAVML DEIINYVQSL QHQVEFLSMK LATVNPRMDF NMETLLPKDI FKGSSSLPHT 360 IYPIDSSVPT FAYEYQSMNI PPLHSDQTQG GYHEMGNGIQ ISKFWEDELH SVVQMGYGQT 420 QLQNPRDEMK SEL

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MEKEFFMNDG SSFYGMDSSV LFNPNWENSM DQSDLFESTL SSIVSSPANS HAGAVIGGGN  60
GGGGGGGGDN LMMRELIGRL GSICSSGFAE RTARFSCFGN KNLAVNGQLC SNETQELSNK  120
SMAGAGVESG KLSRVSSNKS FNVSGIGSQM GVQKGNSMAN KKVMNRFSRS STPENDDSRE  180
GSSVSEQITA GELGFKVNTR KTKSAQTGEA KNVKAAGENH KPNGKKIKPE MDAAKGKAEA  240
KDATQKQNND NSKPPEPPKD YIHVRAKRGQ ATDSHSLAER VRREKISKRM KFLQDLVPGC  300
NKITGKAVML DEIINYVQSL QHQVEFLSMK LATVNPRMDF NMETLLPKDI FKGSSSLPHT  360
IYPIDSSVPT FAYEYQSMNI PPLHSDQTQG GYHEMGNGIQ ISKFWEDELH SVVQMGYGQT  420
QLQNPRDEMK SEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	3e-75	bHLH family protein