PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972245.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 375aa MW: 40876.8 Da PI: 8.1873

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.4	7.6e-34	45	99	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFveav+qLGG++kAtPkt++++m+++gLtl+h+kSHLQkYRl XP_022972245.1 45 KPRLKWTPDLHDRFVEAVNQLGGADKATPKTVMKIMGIPGLTLYHLKSHLQKYRL 99 79****************************************************8 PP
2	Myb_DNA-binding	63.2	5.2e-20	47	98	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++v+av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_022972245.1 47 RLKWTPDLHDRFVEAVNQLGGAdkaTPKTVMKIMGiPGLTLYHLKSHLQKYR 98 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MYHHHHQHNR GKSIHSSDTH LFLQPGNAAA GAGDSSGLVL STDAKPRLKW TPDLHDRFVE 60 AVNQLGGADK ATPKTVMKIM GIPGLTLYHL KSHLQKYRLS KNVHGQANGE GNGSNKTDMG 120 WRVGTVAAVY GDQRRAAEAN GTARTNNIVV APQPSSHPNK SLQISETIQM QIEVQKRLHE 180 QLEVQRHLQL RIEAQGKYLQ TVLEKAQETL GRQDLGSVGL EAAKVQLSEL VSKVSTQCLT 240 AAFPELQQSQ RLCPQQTQPP DCSMDSCLTS CEASKDQQQQ VLLHNSQHAL RPKAIATDHH 300 GLSISIGLLQ GDKGGEGDNG YSPSFGSKKK EGEAAFRYRM AASFLDLNAG EDQQLSNNDH 360 AASATCKMFD LNGFS

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MYHHHHQHNR GKSIHSSDTH LFLQPGNAAA GAGDSSGLVL STDAKPRLKW TPDLHDRFVE  60
AVNQLGGADK ATPKTVMKIM GIPGLTLYHL KSHLQKYRLS KNVHGQANGE GNGSNKTDMG  120
WRVGTVAAVY GDQRRAAEAN GTARTNNIVV APQPSSHPNK SLQISETIQM QIEVQKRLHE  180
QLEVQRHLQL RIEAQGKYLQ TVLEKAQETL GRQDLGSVGL EAAKVQLSEL VSKVSTQCLT  240
AAFPELQQSQ RLCPQQTQPP DCSMDSCLTS CEASKDQQQQ VLLHNSQHAL RPKAIATDHH  300
GLSISIGLLQ GDKGGEGDNG YSPSFGSKKK EGEAAFRYRM AASFLDLNAG EDQQLSNNDH  360
AASATCKMFD LNGFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-104	G2-like family protein