PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972550.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 235aa MW: 25786.8 Da PI: 8.94

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0016	75	97	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++C+k Fs+ L H +H XP_022972550.1 75 YACSICNKLFSSYQALGGHKASH 97 89**********99999998887 PP
2	zf-C2H2	11.5	0.00092	126	148	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k+F++ L H r+H XP_022972550.1 126 HQCSICFKCFPTGQALGGHKRRH 148 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MALEALNSPT SALVHDQLLN HKPFDPLTHR SKRSKRPRFD SDDEYFAFCL LLLARGRISD 60 SDTDNKSSLS PSQSYACSIC NKLFSSYQAL GGHKASHRKS DGGGGGGGEK VSAAITATMS 120 NSCRTHQCSI CFKCFPTGQA LGGHKRRHYD GGSGNKSNSS SFTQTHIREF DLNVPAVPEV 180 WSRFPASDRQ QKSQSQSAKQ DFAEEEVERP HPLKKLRIPI PIPISDDPKS SVFCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43170.1	1e-33	C2H2 family protein