PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972618.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 507aa MW: 54607.9 Da PI: 6.4388

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972618.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.2	4.4e-30	201	259	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+rs +d +++++tYeg+Hnh+ XP_022972618.1 201 NDGCQWRKYGQKIAKGNPCPRAYYRCTGApSCPVRKQVQRSVDDISILITTYEGTHNHP 259 8************************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MEAQPLPTTA DAVQSAGEDE EHAPKHKVPL MADLEKPSME PLSLASASST WKEEDHEHEQ 60 RLKMAKGEMR EVKEENQRLK RCLDQMMRDY ESLKRQFHDM STINNEAAEE VEDMVSLTLG 120 RSSSDQNKNT CPERKPDLQN IQSPADSEQG KEEEAGQTWP PGKVLKGLAA PATGEDEVSQ 180 QNPPKKTRVC VRARCDTPTL NDGCQWRKYG QKIAKGNPCP RAYYRCTGAP SCPVRKQVQR 240 SVDDISILIT TYEGTHNHPL PVSAMAMAST TSAAASMLLS GASTSTSRPG LNPLAIGTAS 300 ANLHGMNMYT NSKQFYLSNS SMLSSSLNHP TITLDLTSNP PSASSSSSSS SPFHKIPSTY 360 PPKYPFTSLD FGSSQPNFMS WNTNINKNVL GMSSDLAKQF PPHSNIYQAC LQQFAKPSTP 420 PPPPLPDTIA AATKAITSDP SFQSALAVAL SSIIGGGNGG EAVQAMSSYV QAAQGQGSMG 480 FQAAPSLTYS TSKSPSSPGD SRDDDTK

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MEAQPLPTTA DAVQSAGEDE EHAPKHKVPL MADLEKPSME PLSLASASST WKEEDHEHEQ  60
RLKMAKGEMR EVKEENQRLK RCLDQMMRDY ESLKRQFHDM STINNEAAEE VEDMVSLTLG  120
RSSSDQNKNT CPERKPDLQN IQSPADSEQG KEEEAGQTWP PGKVLKGLAA PATGEDEVSQ  180
QNPPKKTRVC VRARCDTPTL NDGCQWRKYG QKIAKGNPCP RAYYRCTGAP SCPVRKQVQR  240
SVDDISILIT TYEGTHNHPL PVSAMAMAST TSAAASMLLS GASTSTSRPG LNPLAIGTAS  300
ANLHGMNMYT NSKQFYLSNS SMLSSSLNHP TITLDLTSNP PSASSSSSSS SPFHKIPSTY  360
PPKYPFTSLD FGSSQPNFMS WNTNINKNVL GMSSDLAKQF PPHSNIYQAC LQQFAKPSTP  420
PPPPLPDTIA AATKAITSDP SFQSALAVAL SSIIGGGNGG EAVQAMSSYV QAAQGQGSMG  480
FQAAPSLTYS TSKSPSSPGD SRDDDTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-62	WRKY family protein