PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972627.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 444aa MW: 47635.2 Da PI: 7.9423

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972627.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.5	3.7e-30	138	196	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+rs +d +++++tYeg+Hnh+ XP_022972627.1 138 NDGCQWRKYGQKIAKGNPCPRAYYRCTGApSCPVRKQVQRSVDDISILITTYEGTHNHP 196 8************************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MAKGEMREVK EENQRLKRCL DQMMRDYESL KRQFHDMSTI NNEAAEEVED MVSLTLGRSS 60 SDQNKNTCPE RKPDLQNIQS PADSEQGKEE EAGQTWPPGK VLKGLAAPAT GEDEVSQQNP 120 PKKTRVCVRA RCDTPTLNDG CQWRKYGQKI AKGNPCPRAY YRCTGAPSCP VRKQVQRSVD 180 DISILITTYE GTHNHPLPVS AMAMASTTSA AASMLLSGAS TSTSRPGLNP LAIGTASANL 240 HGMNMYTNSK QFYLSNSSML SSSLNHPTIT LDLTSNPPSA SSSSSSSSPF HKIPSTYPPK 300 YPFTSLDFGS SQPNFMSWNT NINKNVLGMS SDLAKQFPPH SNIYQACLQQ FAKPSTPPPP 360 PLPDTIAAAT KAITSDPSFQ SALAVALSSI IGGGNGGEAV QAMSSYVQAA QGQGSMGFQA 420 APSLTYSTSK SPSSPGDSRD DDTK

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MAKGEMREVK EENQRLKRCL DQMMRDYESL KRQFHDMSTI NNEAAEEVED MVSLTLGRSS  60
SDQNKNTCPE RKPDLQNIQS PADSEQGKEE EAGQTWPPGK VLKGLAAPAT GEDEVSQQNP  120
PKKTRVCVRA RCDTPTLNDG CQWRKYGQKI AKGNPCPRAY YRCTGAPSCP VRKQVQRSVD  180
DISILITTYE GTHNHPLPVS AMAMASTTSA AASMLLSGAS TSTSRPGLNP LAIGTASANL  240
HGMNMYTNSK QFYLSNSSML SSSLNHPTIT LDLTSNPPSA SSSSSSSSPF HKIPSTYPPK  300
YPFTSLDFGS SQPNFMSWNT NINKNVLGMS SDLAKQFPPH SNIYQACLQQ FAKPSTPPPP  360
PLPDTIAAAT KAITSDPSFQ SALAVALSSI IGGGNGGEAV QAMSSYVQAA QGQGSMGFQA  420
APSLTYSTSK SPSSPGDSRD DDTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	9e-62	WRKY family protein