PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972668.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 343aa MW: 38265.5 Da PI: 8.6784

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.8e-16	95	144	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ ++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022972668.1 95 SQYRGVTCYRRTGRWESHIWD------NgKQVYLGGFDTAHSAARAYDRAAIKFRG 144 78**99999******......44**********************997 PP
2	AP2	45.4	2e-14	187	237	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k +grW+A+ +s g +k+++lg f+++ eAa+a+++a+ k +g XP_022972668.1 187 SKYRGVTLHK-SGRWEARMGQFS--G-KKYVYLGLFDSEVEAARAYDKAAIKHNG 237 89******.7**77753..2.6******99********99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MLDLNLCILS GDSASASGSG SADHSNTTAD EDFSSNVNSG FTFSFSILNN NGTEDQLDRT 60 ALFHPVAGVC SQRKWLDQSV KPVKKGRRGP KSRSSQYRGV TCYRRTGRWE SHIWDNGKQV 120 YLGGFDTAHS AARAYDRAAI KFRGVHADIN FDISDYREEI KEMRNLSKEE FVHILRRQSN 180 GFSRGSSKYR GVTLHKSGRW EARMGQFSGK KYVYLGLFDS EVEAARAYDK AAIKHNGREA 240 VTNFDQSCYY GMEIAFESES HGDIDLSLGI APPCPPEHQT DNRVGRSQPP TVEHPHSLSS 300 PPQQHHQDSL LLPPSPRHLP PASPFLRYHI PPSISAASNR LLL

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MLDLNLCILS GDSASASGSG SADHSNTTAD EDFSSNVNSG FTFSFSILNN NGTEDQLDRT  60
ALFHPVAGVC SQRKWLDQSV KPVKKGRRGP KSRSSQYRGV TCYRRTGRWE SHIWDNGKQV  120
YLGGFDTAHS AARAYDRAAI KFRGVHADIN FDISDYREEI KEMRNLSKEE FVHILRRQSN  180
GFSRGSSKYR GVTLHKSGRW EARMGQFSGK KYVYLGLFDS EVEAARAYDK AAIKHNGREA  240
VTNFDQSCYY GMEIAFESES HGDIDLSLGI APPCPPEHQT DNRVGRSQPP TVEHPHSLSS  300
PPQQHHQDSL LLPPSPRHLP PASPFLRYHI PPSISAASNR LLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	2e-88	AP2 family protein