PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972741.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 372aa MW: 39566.6 Da PI: 8.319

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	131.4	8.3e-41	68	206	2	110
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s +ss+s+ s + XP_022972741.1 68 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSGSTMSVPsqlrsss 162 789******************************************************************99988888888888666666655666 PP TCP 89 ......................kaaksaakskksqksaasalnl 110 ++ +s+a +++++++++ l XP_022972741.1 163 yynpnfslhqprrtlfpgfglsSETSSTALLNFQSTNTSNSLVQ 206 66777777777777777777643333333555555555544444 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MEGGDDLHRY HHHHHHRPNF PFQLLEKKDD AAAASCSTSP YPSLAISTDP TTTAAAAAAA 60 VEPSKKPPPK RTSTKDRHTK VDGRGRRIRM PALCAARVFQ LTRELGHKSD GETIEWLLQQ 120 AEPSVIAATG TGTIPANFTS LNISLRSSGS TMSVPSQLRS SSYYNPNFSL HQPRRTLFPG 180 FGLSSETSST ALLNFQSTNT SNSLVQAKPE LRDTTTSLDL SDAAEDISIG RKRRPSPEQE 240 FSTGAIPASH GGGQVPANLW MLANTNNQGM GGDPIWTFPS VNNSGLYRGT MSSGLHFMNF 300 PGPVTLVPGQ QLGSSASGGS NSSSEAHFNI LAGLNPYRSV SSSGVMEAQG SGSQSHHGGG 360 GDDRHDTTSH HS

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MEGGDDLHRY HHHHHHRPNF PFQLLEKKDD AAAASCSTSP YPSLAISTDP TTTAAAAAAA  60
VEPSKKPPPK RTSTKDRHTK VDGRGRRIRM PALCAARVFQ LTRELGHKSD GETIEWLLQQ  120
AEPSVIAATG TGTIPANFTS LNISLRSSGS TMSVPSQLRS SSYYNPNFSL HQPRRTLFPG  180
FGLSSETSST ALLNFQSTNT SNSLVQAKPE LRDTTTSLDL SDAAEDISIG RKRRPSPEQE  240
FSTGAIPASH GGGQVPANLW MLANTNNQGM GGDPIWTFPS VNNSGLYRGT MSSGLHFMNF  300
PGPVTLVPGQ QLGSSASGGS NSSSEAHFNI LAGLNPYRSV SSSGVMEAQG SGSQSHHGGG  360
GDDRHDTTSH HS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	4e-55	TCP family protein