PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972812.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 381aa MW: 41706.7 Da PI: 8.3875

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.9	5.3e-34	40	94	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFveav+qLGG++kAtPkt++++m++ gLtl+h+kSHLQkYRl XP_022972812.1 40 KPRLKWTPDLHDRFVEAVNQLGGPDKATPKTVMKIMGISGLTLYHLKSHLQKYRL 94 79****************************************************8 PP
2	Myb_DNA-binding	64.8	1.7e-20	42	93	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++v+av+qlGg+ t+kt+++ mg g+tl+++ks++qky+ XP_022972812.1 42 RLKWTPDLHDRFVEAVNQLGGPdkaTPKTVMKIMGiSGLTLYHLKSHLQKYR 93 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MYHHHQHRGK SIHSSERHLF LQGGNGPGGD SGLVLSTDAK PRLKWTPDLH DRFVEAVNQL 60 GGPDKATPKT VMKIMGISGL TLYHLKSHLQ KYRLSKNMHG QANGGSGTNN KTGMGWRVGT 120 VAVSVDQRLG EANGAARTNS IAVAPQASSQ PNKSLQISET IQMQIEVQKR LHEQLEVQRH 180 LQLRIEAQGK YLQTVLEKAQ ETLGRQNLGT VGLEAAKVQL SELVSKVSTQ CLTAAFPELH 240 HQQQQQNQPQ RLCPQQSQPP DCSMDSCLTS CEGSKDQQNS HLALQPYAIA THRGSSAADQ 300 LHGLSMGMGL VQGEKGEGYN GYSPSEGQRF GSTRKEGVEK EKVVEGVFRY RMDLNAGEDQ 360 LSDNDHAASN TCKMFDLNGF S

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MYHHHQHRGK SIHSSERHLF LQGGNGPGGD SGLVLSTDAK PRLKWTPDLH DRFVEAVNQL  60
GGPDKATPKT VMKIMGISGL TLYHLKSHLQ KYRLSKNMHG QANGGSGTNN KTGMGWRVGT  120
VAVSVDQRLG EANGAARTNS IAVAPQASSQ PNKSLQISET IQMQIEVQKR LHEQLEVQRH  180
LQLRIEAQGK YLQTVLEKAQ ETLGRQNLGT VGLEAAKVQL SELVSKVSTQ CLTAAFPELH  240
HQQQQQNQPQ RLCPQQSQPP DCSMDSCLTS CEGSKDQQNS HLALQPYAIA THRGSSAADQ  300
LHGLSMGMGL VQGEKGEGYN GYSPSEGQRF GSTRKEGVEK EKVVEGVFRY RMDLNAGEDQ  360
LSDNDHAASN TCKMFDLNGF S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-106	G2-like family protein