PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022972958.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 149aa    MW: 16544 Da    PI: 4.5954
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022972958.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY50.63.8e-165432259
                    EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                    r+YYrC+s+ gC ++k+vers+ dp+ ++itY+geH h+
  XP_022972958.1  5 RNYYRCSSSkGCGARKQVERSNADPDSFIITYTGEHIHP 43
                    9******998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
IDDHRNYYRC SSSKGCGARK QVERSNADPD SFIITYTGEH IHPRPTHRNF LAGSSRNRSL  60
SSVTNKNPTG DPNPSLTTTA LVGSGSSPAD SPMTPFNDDY GGGDEKEGEM FEDMAIDSDD  120
DYDDILIPNL MVRDEIFAGF DEIRRRRPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.16e-28WRKY family protein