PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973060.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ERF

Protein Properties

Length: 267aa MW: 29249.9 Da PI: 7.347

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973060.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	62.8	7.2e-20	84	133	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrd +r r +lg+++taeeAa a++ a+ kl+g XP_022973060.1 84 KFRGVRRRP-WGKWAAEIRD----SdRRVRMWLGTYDTAEEAAIAYDSAAVKLRG 133 89*****.******....3346***********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MEAPTILRKP GNFASRTNVG SRIVRISMTD PDATDSSSSD EDAVNFTRRR VKRYVGEITI 60 GTAADDGGRK KKRKKKKQAG NVRKFRGVRR RPWGKWAAEI RDSDRRVRMW LGTYDTAEEA 120 AIAYDSAAVK LRGPTALTNF PTPPPPPPPF SCDDPSSSTN LSSPTSVLHY RTHLVECLPS 180 DRGTVNGAAA DVSPVVDFLF SDDIFKSIIL EPPFFLEYQA NPIPETPWAG GGGGSGETVA 240 AAECNKKVEE EDYFEEILMG SDPLVVL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	75	RKKKRKK
2	69	76	RKKKRKKK
3	69	77	RKKKRKKKK
4	70	76	RKKKRKK
5	71	75	KKRKK
6	71	77	RKKKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53290.1	1e-21	ERF family protein