PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022973563.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 268aa    MW: 29277.7 Da    PI: 9.6673
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022973563.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.11.7e-12114158347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG g+W+ I+r   + Rt+ q+ s+ qky
   XP_022973563.1 114 PWTEEEHRIFLIGLEKLGRGDWRGISRNYVTSRTPTQVASHAQKY 158
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MGRKCSHCGN IGHNSRTCTN FMPSTPNLVG SNGIIRLFGV HLDASSSSSS YFPIKKSFST  60
DCLPSSPSPS SSSSFSSSTR VHLDHNSLEE TRSSNGYLSD GLLTREQERK KGVPWTEEEH  120
RIFLIGLEKL GRGDWRGISR NYVTSRTPTQ VASHAQKYFL RQSTANKKNR RSSLFDTVGA  180
ANDSTTTNSK NIELSLKNPT RSSCMEVMKN NEEQKLLGAS SSSSPSSVWV YDDLELTLGA  240
PRAPNLELEH PKKAPPPGSL LVGPISVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-58MYB_related family protein