PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022973632.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 291aa    MW: 33156.4 Da    PI: 5.448
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022973632.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind104.77.4e-33151072103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F+ k+y++++d+ ++++i+w + +nsf+vld+ +f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +++ +ll++
  XP_022973632.1  15 FVLKTYQMVNDPLTDTFITWGSANNSFLVLDPLHFSHTLLPAYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANQWFLRDQFHLLRN 100
                     9****************************************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i r+k++
  XP_022973632.1 101 IVRRKQS 107
                     ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDANSESAND IVAPFVLKTY QMVNDPLTDT FITWGSANNS FLVLDPLHFS HTLLPAYFKH  60
NNFSSFVRQL NTYGFRKVDP DRWEFANQWF LRDQFHLLRN IVRRKQSTNS RLCEMGDEEL  120
VTEIARLRKE QKVLEEELEG MKKRLETTEK RPQQMMAFLH KVAEDPEILP RMMLQKDRPG  180
AHIGDKKRRL MISSSSSSPS TTTMTTTSLE AEEIEEEGSW RPNFSSPEVS GPAGFCNHVQ  240
AWNLAEAEAG GMDISRSRSG GEMKNSTEMM GTVEESNPAP PYPFSLFGCG F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.12e-82HSF family protein