PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022973990.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 235aa    MW: 25866.9 Da    PI: 5.4784
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022973990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH407e-13171216655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+e++P+     +k  + a++Le+AveY+k Lq
  XP_022973990.1 171 SIAERVRRTRISDRIRKLQEVVPNM----DKQTNTADMLEEAVEYVKFLQ 216
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MQSTTGGATG SRSSGGGLAR FRSAPAAWLE ALLEDEEEDL LRPNQCLTQL LAGNSSDLDS  60
PADQALFEPN PSAGFQRQNS SPAEFLGASG IGEGFYSSYA INSSAALEIS PTSKRGREVD  120
AQNFPPKFSP QLKREGSGVS SLIDMEMEKL LEDSVPCRVR AKRGCATHPR SIAERVRRTR  180
ISDRIRKLQE VVPNMDKQTN TADMLEEAVE YVKFLQKQIQ ELTEHQRRCT CTVKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.12e-70bHLH family protein