PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022974115.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 180aa    MW: 20684.5 Da    PI: 9.4306
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022974115.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF931.4e-291059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien +nrqvtfskRrng+lKKA+ELSvLC+aeva+iifsstgkl e++s
  XP_022974115.1 10 RIENATNRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSTGKLCEFAS 59
                    8***********************************************86 PP
2K-box68.62.1e-23851691397
           K-box  13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     ++     ++a+L keie+L+ ++R+llG++L+s s++eLqq+eqqL++sl ++R++K+e ++eqi++l++kek l  en++L kk
  XP_022974115.1  85 HHHDQADQAANLLKEIESLEDSKRKLLGQGLGSSSYEELQQIEQQLQSSLAHVRATKHEAYKEQIDQLKEKEKYLAAENEKLAKK 169
                     5666678899************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MVRGKTQMRR IENATNRQVT FSKRRNGLLK KAFELSVLCE AEVALIIFSS TGKLCEFASS  60
SMQATVERFQ RHTRVTHHLE RSLPHHHDQA DQAANLLKEI ESLEDSKRKL LGQGLGSSSY  120
EELQQIEQQL QSSLAHVRAT KHEAYKEQID QLKEKEKYLA AENEKLAKKG YKTDEVKCIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.14e-61MIKC_MADS family protein