PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974116.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 177aa MW: 20336.1 Da PI: 9.1859

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.1	1.3e-29	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien +nrqvtfskRrng+lKKA+ELSvLC+aeva+iifsstgkl e++s XP_022974116.1 10 RIENATNRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSTGKLCEFAS 59 8***********************************************86 PP
2	K-box	70.1	6.9e-24	85	172	13	100
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ ++a+L keie+L+ ++R+llG++L+s s++eLqq+eqqL++sl ++R++K+e ++eqi++l++kek l en++L kk +e XP_022974116.1 85 HHHDQADQAANLLKEIESLEDSKRKLLGQGLGSSSYEELQQIEQQLQSSLAHVRATKHEAYKEQIDQLKEKEKYLAAENEKLAKKTDE 172 5666678899**************************************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MVRGKTQMRR IENATNRQVT FSKRRNGLLK KAFELSVLCE AEVALIIFSS TGKLCEFASS 60 SMQATVERFQ RHTRVTHHLE RSLPHHHDQA DQAANLLKEI ESLEDSKRKL LGQGLGSSSY 120 EELQQIEQQL QSSLAHVRAT KHEAYKEQID QLKEKEKYLA AENEKLAKKT DEVKCIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	3e-61	MIKC_MADS family protein