PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974230.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 305aa MW: 34042 Da PI: 8.1593

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	84.5	2.6e-26	50	144	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.seceaesssssasnsssg.......k 89 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+L + ++sk i+WLl k i++l+ ++ ++ s + +++ + +++ss+ + XP_022974230.1 50 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGlSPFHQHMLFPQYHHNSSTlpppfafD 144 79*************************************************************44444222233333333333333333333331 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MLRSSQEKGF GGKDEGISDE KYDMAKGSTR SRQWSGFRNP RIVRVSRSFG GKDRHSKVCT 60 IRGLRDRRIR LSVPTAIQLY DLQDKLKLGQ PSKVIDWLLD VTKLDIDKLP PLQIPTGLSP 120 FHQHMLFPQY HHNSSTLPPP FAFDTKDSST TLIRDVVNQT TMIEKSKSKG KWIDGGNDEE 180 VEDYNEQIMI NNCNAYNYNT CDHDHQHSCG GFPSQTEAQT SSSSCSSLFF TPYASYITNP 240 FESHIHFLSS NSHTLSNPFI PSSLHPFASQ NLKPFPPNFN LKQLLHAGNN DGCGSGKDGA 300 ASGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	1e-46	TCP family protein