PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022974265.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 230aa    MW: 25940.6 Da    PI: 8.3003
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022974265.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.41.3e-32156214159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+
  XP_022974265.1 156 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHS 214
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MEGSQRSELP NYQLQVSFLS NAPHPQPIHE MGFVHFEDHN QVLSFLAPNS NAATTTTAPS  60
TTTTDNTTTT TTAMPSAFTT PPHAHLLSRP SWSNDQVGTL DPKPGGDENC TGSTSDGSNS  120
CGRWRNSNAD KTKVKVRRKL REPRFCFQTR SDVDVLDDGY KWRKYGQKVV KNSLHPRSYY  180
RCTHSNCRVK KRVERLSEDC RMVITTYEGR HNHSPCDDSN SSDHEPFTSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135141KVRRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.12e-64WRKY family protein